There are heaps. In the order that I think of them...

Botanica, Blackarachnia, Airazor, Strika, Animated Red Alert, Esmeral, Lyzack, Alice, Glyph, Antagony, Beta, Flareup, Firestar, Rosanna, Flip Sides, Road Rage, Small Foot, Pathfinder, Scylla, Glit, Roulette, Shadow Striker, Sari and the Paradron Medics.

And Shrapnel and Starscream were girls in the French version of Transformers The Movie.