Looks like the Wave One Deluxes will have comics in future waves they are packed in as well...

On the Entertainment Earth, the Wave One Generations Deluxes look to be having a re-release around June, and the packaging image has them with comics...

Alpha Bravo
Dragstrip
Firefly
Skydive

Maybe the first wave was rushed through the factory to get to stores before Christmas, and the comics weren't ready yet, but later releases of that first wave will have them.

The Deluxe Wave 2 Revision case has a wave 1 Dragstrip in it, so if it comes with a comic, then it was just the Wave 1 cases that missed out.